PDB API for structural similarity searchin
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3.1 years ago
Joe 19k

Hi all,

Does anyone know if there is a way to programmatically query PDB's advanced search tools? I know they have a RESTful API for much of the basics but I can't find any indication of whether I can achieve this via it.

I have a bunch of protein structures, and I would like to programmatically query them against PDB using one or more of their advanced structure matching search options:

...structure alignments (FATCAT, CE, Mammoth, TM-Align, TopMatch)...

Any ideas?

pdb protein structure api • 683 views
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