The best way to produce gene body coverage

Question

[Javad]

Hello every body,

Can anyone suggest an approach to produce gene body coverage. I already used qualimap. I am looking for other suggestions.

Best

[cpad0112]

https://hartleys.github.io/QoRTs/Rhtml/makePlot.genebody.coverage.html

[Devon Ryan]

As in a plot of it or a metric?

Answer 1

[Antonio R. Franco]

RseQC is another nice option