Question: assemblers choose high k-mers: what does that mean?
2.7 years ago by
willnotburn • 40
United States, Michigan State Universtiy
willnotburn • 40 wrote:
I am co-assembling metagenomic PE reads.
metaSPAdesconsistently choose the final assembly as one based on the longest k-mer (141).
What does that tell about my input data and the assembly? Any cause for joy or concern?
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