Question: Venue to publish a bioinformatics tool
1
gravatar for 9606
4 months ago by
9606310
Italy
9606310 wrote:

I would like to (try to) publish a software I have been developing; the software is for analyzing and integrating data from ENCODE, and of course will be open source.

I know about Bioinformatics APPLICATIONS NOTES as a possible venue, but I would like to evaluate alternatives.

Can anyone point me to some valid journal accepting this kind of publications?

ADD COMMENTlink modified 4 months ago by EagleEye5.9k • written 4 months ago by 9606310
1

F1000 software tools.

Alternatively you can let JANE figure this out for you.

ADD REPLYlink modified 4 months ago • written 4 months ago by genomax58k

NAR has webserver and database issues. Pretty competitive.

ADD REPLYlink written 4 months ago by Eric Lim1.1k
3
gravatar for EagleEye
4 months ago by
EagleEye5.9k
Sweden
EagleEye5.9k wrote:

Here are few journals to consider,

  • BMC Bioinformatics
  • Briefings in Bioinformatics
  • Molecular systems biology
  • PLOS Computational Biology
  • GigaScience
  • Nucleic Acids Research
  • Genome Biology (Software)
ADD COMMENTlink modified 4 months ago • written 4 months ago by EagleEye5.9k
1
gravatar for b.nota
4 months ago by
b.nota5.2k
Netherlands
b.nota5.2k wrote:

I had good experience with Molecular Informatics, after rejection by Bioinformatics. It is indexed by pubmed, and impact factor is just below 2.

ADD COMMENTlink written 4 months ago by b.nota5.2k
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