Question: Venue to publish a bioinformatics tool
1
gravatar for 9606
12 months ago by
9606320
Italy
9606320 wrote:

I would like to (try to) publish a software I have been developing; the software is for analyzing and integrating data from ENCODE, and of course will be open source.

I know about Bioinformatics APPLICATIONS NOTES as a possible venue, but I would like to evaluate alternatives.

Can anyone point me to some valid journal accepting this kind of publications?

ADD COMMENTlink modified 12 months ago by EagleEye6.4k • written 12 months ago by 9606320
1

F1000 software tools.

Alternatively you can let JANE figure this out for you.

ADD REPLYlink modified 12 months ago • written 12 months ago by genomax69k

NAR has webserver and database issues. Pretty competitive.

ADD REPLYlink written 12 months ago by Eric Lim1.4k
3
gravatar for EagleEye
12 months ago by
EagleEye6.4k
Sweden
EagleEye6.4k wrote:

Here are few journals to consider,

  • BMC Bioinformatics
  • Briefings in Bioinformatics
  • Molecular systems biology
  • PLOS Computational Biology
  • GigaScience
  • Nucleic Acids Research
  • Genome Biology (Software)
ADD COMMENTlink modified 12 months ago • written 12 months ago by EagleEye6.4k
1
gravatar for Benn
12 months ago by
Benn7.0k
Netherlands
Benn7.0k wrote:

I had good experience with Molecular Informatics, after rejection by Bioinformatics. It is indexed by pubmed, and impact factor is just below 2.

ADD COMMENTlink written 12 months ago by Benn7.0k
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