Venue to publish a bioinformatics tool
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3.3 years ago
9606 ▴ 330

I would like to (try to) publish a software I have been developing; the software is for analyzing and integrating data from ENCODE, and of course will be open source.

I know about Bioinformatics APPLICATIONS NOTES as a possible venue, but I would like to evaluate alternatives.

Can anyone point me to some valid journal accepting this kind of publications?

academy publication software bioinformatics • 1.5k views
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1
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F1000 software tools.

Alternatively you can let JANE figure this out for you.

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NAR has webserver and database issues. Pretty competitive.

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3.3 years ago
EagleEye 7.1k

Here are few journals to consider,

  • BMC Bioinformatics
  • Briefings in Bioinformatics
  • Molecular systems biology
  • PLOS Computational Biology
  • GigaScience
  • Nucleic Acids Research
  • Genome Biology (Software)
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3.3 years ago
Benn 8.2k

I had good experience with Molecular Informatics, after rejection by Bioinformatics. It is indexed by pubmed, and impact factor is just below 2.

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