How to resolve kinship with the software "king" using GWAS genotyping data?
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3.4 years ago
moxu ▴ 500

"king" can impute IBS0 and kinship coefficient using GWAS samples. It can generate Z0 (probability of IBD0) for within-family members but this is not common for a GWAS population.

So how can you resolve the kinship using the king output file? For instance, how can you tell parent-child, monozygotic twins, full siblings, 2nd degree, 3rd degree, and unrelated from each other (using IBS0 + kinship)?

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