Could someone give me suggestions on how I should prep my data to use it with CMS classifier, R package? I am currently working on subtyping colorectal cancer datasets using CMS and CRIS classifiers, R package. I am constantly running into errors everytime I run the command
CMSdata <- probesToEntrez(data, data_gpl, entrez = "Entrez.Gene") Error in rowsum.data.frame(data, partition, na.rm = T) :non-numeric data frame in rowsum
Any help wth this, would honestly be appreciated. Much thanks.