Question: recode SNPs ATGC illumina
0
gravatar for ami23.sarr
4 months ago by
ami23.sarr0
ami23.sarr0 wrote:

i have a snp typing file whose genotypes are in ATGC format that i want to convert to 012(Genotypes must be coded as dosage of allele 'b' 0, 1, 2.) your help is welcome

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ADD COMMENTlink modified 4 months ago • written 4 months ago by ami23.sarr0

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ADD REPLYlink written 4 months ago by genomax58k
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gravatar for kumar.vinod81
4 months ago by
kumar.vinod81280
New Delhi
kumar.vinod81280 wrote:

Export file in PLINK format and you will find a lot of options in PLINK for genotypes recoding.

ADD COMMENTlink modified 4 months ago • written 4 months ago by kumar.vinod81280

thanks Kumar.vinod81 is it possible that you leave me a message on my mail (ami23.sarr@outlook.fr) so that I transfer the file so that you help me to do it because I am not familiar with the software plink

ADD REPLYlink written 4 months ago by ami23.sarr0
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