I am vinay kumar reddy nannuru, i have a vcf file of 92 samples with 14000 variants in each and i want to merge with another publicly available dataset consists of 30,000 samples with 950,000 variants. How can i merge them by having all samples in same output file with similar variant positions in all samples of output. Could someone please give me a clear explanation. And second question how can i select some subset of samples from the second dataset of 30000 samples. Thank for your time.
Vinay Kumar Reddy Nannuru