I have used SOAP DENOVO to assemble pytophthora genome. In .scafSeq file am geeting approximately 5,00,000 scaffolds.
In the headers of the .scafSeq file am getting,
I want to know what "7.0 and 4.0" indicate? And these value range from 0 to 158. Should I filter my scaffolds based on these values or I should consider all the scaffolds of .scafSeq file?
Please let me know.
Thank you in Advance.