Hi everyone, I have a denovo assemble by Trinity assembler. I want to find some known gene from databases like NCBI and others in order to detect the similarity or homology search from my transcriptome assemble. Do you know an online aligner or command line software? I know the NCBI blast command line but it is a little complex at this time for me. thanks.
Question: How can i run a local blastn on my denovo assemble (rnaseq data) for detection known gene?
12 months ago by
pr.khavari • 0
Iran, Tehran, University of tehran
pr.khavari • 0 wrote:
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