What is the difference between SPMR and RPM normalization?
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5.7 years ago

Hello All:

I am currently doing some chip seq analysis and using MACS2 for peak calling. I am really confused between the Signal per million reads and Reads per million normalization. Are these two same or different methods? Can some one explain this clearly?

Thank you, Ashwini Challa

ChIP-Seq Peak Calling using MACS2 • 1.6k views
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