Question: Mauve export similarity
gravatar for rmf
20 months ago by
rmf920 wrote:

I am using Mauve multiple genome alignment tool v20150226 to align two fasta files. The GUI displays a line graph.

enter image description here

I think the line graph denotes a measure of similarity of that region in one sequence to the other. Is there some way to export this similarity measure as a text file? I would like to modify it and import that into IGV as a bedGraph.

ADD COMMENTlink modified 18 months ago by Biostar ♦♦ 20 • written 20 months ago by rmf920

Mauve should have given you an XMFA file of the alignment I think?

ADD REPLYlink written 20 months ago by Joe16k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1813 users visited in the last hour