Closed:Turning a Reference Genome Into a File With Single Nucleotide Positions (Essentially an ATCGmap.)
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5.7 years ago
gtasource ▴ 60

Hi all,

I am looking to turn a referenced genome into a file where every nucleotide is its own line. It'll be very similar to an ATCGMap file, except it won't have any methylation information. So column will be the chromosome, column 2 will be the nucleotide, and column 3 will be the position.

Anybody have any idea of the most productive way of going about this?

Thanks!

bedtools reference genome • 172 views
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