Question: Finding patients in TCGA with two types of malignancies
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gravatar for dras
15 months ago by
dras0
dras0 wrote:

Is there a way to find patients in TCGA that have (or had) two types of malignancies (for example ovarian cancer and breast cancer)? Help would be much appreciated!

tcga • 354 views
ADD COMMENTlink modified 15 months ago by Kevin Blighe51k • written 15 months ago by dras0
0
gravatar for Kevin Blighe
15 months ago by
Kevin Blighe51k
Kevin Blighe51k wrote:

In the legacy data archive, data on other malignancies is recorded, but it's scant. Columns of interest include:

  • history_other_malignancy
  • histologic_diagnosis_other
  • site_of_primary_tumor_other
  • stage_other

Search for the Biotab files under 'Clinical' at https://portal.gdc.cancer.gov/legacy-archive/

Metastatic events are recorded, too, as I show here: TCGA metastatic samples

Kevin

ADD COMMENTlink modified 15 months ago • written 15 months ago by Kevin Blighe51k

Thanks for the answer!

ADD REPLYlink written 14 months ago by dras0

You are welcome, Sir.

ADD REPLYlink written 14 months ago by Kevin Blighe51k
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