Question: sample ID error in cstacks
gravatar for sara.razi86
5 months ago by
sara.razi860 wrote:

Hi, I'm trying to do GBS pipeline in stacks software.I run the pstacks and gave pstacks output including "alleles", "models", snps" and "tags" files for each samples , but when I run cstacks, it gives me this error: " Sample ID '184' occurs more than once. Sample IDs must be unique Aborted". While I checked the samples ID, I did not have any other sample ID with this number. Do you know how can I fix this problem? sara

gbs cstacks • 287 views
ADD COMMENTlink modified 5 months ago • written 5 months ago by sara.razi860
  • GBS pipeline
  • stacks software
  • cstacks
  • pstacks output

All of these keywords and you still use next-gen (next gen what?) and software error (most generic tag ever) as the tags, that's just lazy. Please edit your question and add relevant tags.

ADD REPLYlink modified 5 months ago • written 5 months ago by RamRS20k

Hi Sara, try to post your question here:!forum/stacks-users

Cheers, Carlo

ADD REPLYlink written 5 months ago by carlopecoraro2840
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