Question: sample ID error in cstacks
gravatar for sara.razi86
10 months ago by
sara.razi860 wrote:

Hi, I'm trying to do GBS pipeline in stacks software.I run the pstacks and gave pstacks output including "alleles", "models", snps" and "tags" files for each samples , but when I run cstacks, it gives me this error: " Sample ID '184' occurs more than once. Sample IDs must be unique Aborted". While I checked the samples ID, I did not have any other sample ID with this number. Do you know how can I fix this problem? sara

gbs cstacks • 409 views
ADD COMMENTlink modified 10 months ago • written 10 months ago by sara.razi860
  • GBS pipeline
  • stacks software
  • cstacks
  • pstacks output

All of these keywords and you still use next-gen (next gen what?) and software error (most generic tag ever) as the tags, that's just lazy. Please edit your question and add relevant tags.

ADD REPLYlink modified 10 months ago • written 10 months ago by RamRS22k

Hi Sara, try to post your question here:!forum/stacks-users

Cheers, Carlo

ADD REPLYlink written 10 months ago by carlopecoraro21.1k
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