Phasing non-human genomes with Beagle - do I need to divide subjects by population?
0
0
Entering edit mode
5.9 years ago

Hello, BioStars Users,

As per title, I intend to phase my samples using Beagle, either v 4 or v 5. I also have recombination data available from literature. I was wondering if I need to split my input file dividing the subjects by population. I currently have a total of 150 subjects, what minimum sample size would I need for reliable results?

Thank you for your kind attention,

Max

Beagle SNP phasing • 1.2k views
ADD COMMENT
0
Entering edit mode

Did you find the answer to this? I'm looking for the same bit of information

ADD REPLY

Login before adding your answer.

Traffic: 2745 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6