Question: GO Enrichment for non model orlganisms
0
gravatar for ira
9 months ago by
ira0
ira0 wrote:

I have bunch of gene ids from Streptomyces clavuligerus

BB341_01025
BB341_01200
BB341_01285
BB341_01420
BB341_01425
BB341_02985

I am using blastn to retrieve protein sequences. Is there some way to get GO enrichment for the genes without using blast2go which is a proprietary software.

Thanks

go rna-seq • 256 views
ADD COMMENTlink modified 9 months ago by RamRS22k • written 9 months ago by ira0
1

You can use Blast2GO for this kind of analysis. Also, I believe similar questions have been asked before here on biostars, make sure to check that.

ADD REPLYlink written 9 months ago by Martombo2.4k
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