Question: pacbio-illumina hybrid assemblies
2
gravatar for from the mountains
11 months ago by
United States
from the mountains60 wrote:

We are looking into assembly with pacbio and illumina data, and wondering if there are any tools or well-validated workflows for hybrid assemblies, as well as any recommendations for coverage. this is for a eukaryotic genome. additionally, has anyone ever tried a pacbio-10XGenomics hybrid assembly?

ADD COMMENTlink modified 8 weeks ago by ricardoguerreiro212120 • written 11 months ago by from the mountains60
0
gravatar for ricardoguerreiro2121
8 weeks ago by
ricardoguerreiro212120 wrote:

This guy seems to be trying it with quickmerge.

https://github.com/mahulchak/quickmerge/issues/22

It would be good to use the advantage of the 10x supernova assemblies and not just feed them as simple illumina data to another assembler...

ADD COMMENTlink written 8 weeks ago by ricardoguerreiro212120
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