Question: Regulatory network with python and R
0
gravatar for The Bright Star
17 months ago by
Germany
The Bright Star0 wrote:

Hi All, I am a beginner and I would highly appreciate if you tell me How to build regulatory network with python ? thanks in advance

python regulatory network R • 645 views
ADD COMMENTlink modified 17 months ago by Bioaln340 • written 17 months ago by The Bright Star0
1

This question doesn't make much sense to me unless it is prone to trivial answers, please elaborate on available data, analysis, and what you have tried.

ADD REPLYlink written 17 months ago by Michael Dondrup47k
0
gravatar for Bioaln
17 months ago by
Bioaln340
France
Bioaln340 wrote:

Hello, Given very sparse definition, it seems you are trying to simply constructy a network object, useful for further analysis.

  1. Obtain edges between genes based on expression
  2. Compute properties of the network

The first step is an active research area. I would suggest you look at: https://bioconductor.org/packages/release/bioc/html/GeneNetworkBuilder.html for starters.

The second step highly depends on what you are trying to achieve. Please describe that in a bit more detail.

ADD COMMENTlink written 17 months ago by Bioaln340

Many thanks

ADD REPLYlink modified 17 months ago by Kevin Blighe54k • written 17 months ago by The Bright Star0

If this helped, please mark the question as answered.

ADD REPLYlink written 17 months ago by Bioaln340
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 791 users visited in the last hour