Question: Regulatory network with python and R
0
gravatar for The Bright Star
2.0 years ago by
Germany
The Bright Star0 wrote:

Hi All, I am a beginner and I would highly appreciate if you tell me How to build regulatory network with python ? thanks in advance

python regulatory network R • 857 views
ADD COMMENTlink modified 2.0 years ago by Bioaln340 • written 2.0 years ago by The Bright Star0
1

This question doesn't make much sense to me unless it is prone to trivial answers, please elaborate on available data, analysis, and what you have tried.

ADD REPLYlink written 2.0 years ago by Michael Dondrup47k
0
gravatar for Bioaln
2.0 years ago by
Bioaln340
France
Bioaln340 wrote:

Hello, Given very sparse definition, it seems you are trying to simply constructy a network object, useful for further analysis.

  1. Obtain edges between genes based on expression
  2. Compute properties of the network

The first step is an active research area. I would suggest you look at: https://bioconductor.org/packages/release/bioc/html/GeneNetworkBuilder.html for starters.

The second step highly depends on what you are trying to achieve. Please describe that in a bit more detail.

ADD COMMENTlink written 2.0 years ago by Bioaln340

Many thanks

ADD REPLYlink modified 2.0 years ago by Kevin Blighe65k • written 2.0 years ago by The Bright Star0

If this helped, please mark the question as answered.

ADD REPLYlink written 2.0 years ago by Bioaln340
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