Regulatory network with python and R
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3.1 years ago

Hi All, I am a beginner and I would highly appreciate if you tell me How to build regulatory network with python ? thanks in advance

R Python Regulatory network • 1.2k views
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This question doesn't make much sense to me unless it is prone to trivial answers, please elaborate on available data, analysis, and what you have tried.

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3.1 years ago
Bioaln ▴ 350

Hello, Given very sparse definition, it seems you are trying to simply constructy a network object, useful for further analysis.

  1. Obtain edges between genes based on expression
  2. Compute properties of the network

The first step is an active research area. I would suggest you look at: https://bioconductor.org/packages/release/bioc/html/GeneNetworkBuilder.html for starters.

The second step highly depends on what you are trying to achieve. Please describe that in a bit more detail.

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Many thanks

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If this helped, please mark the question as answered.

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