I'm new to Cytoscape. I'm trying to input my experimental gene expression time-series into the network. I've created the network based on the interactions (IMEX, INtact, Mint) and input microarray gene expression publicly available dataset.
Now, I would like to input my own data (time-series gene expression) to visualise how the data corresponds to the uploaded microarray dataset. I have 8 different treatments and few time intervals, so I would like to also visualise the effect of the treatment on the gene expression and relate that to the pathway enrichment by a given treatment.
I would like to ask you about any useful tutorial related to that problem or advice on how I can do it.
Thank you in advance for your help.