extract gseaResult in clusterprofiler
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Entering edit mode
5.6 years ago
sugus ▴ 150

Hi there,

My question is how to extract informtation of a specific pathway from gseaResult object derived from GSEA() in clusterProfiler R package.

Basicly, I can just use gesaplot to plot what I am interested in gseaResult, but I want to output a detailed information of this specific pathway. How to do that?

Please advise, Many thanks advanced.

clusterProfiler GSEA • 3.4k views
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2
Entering edit mode
5.6 years ago
Guangchuang Yu ★ 2.6k

as.data.frame to convert the object to data frame?

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