problem in interpretation of Gistic copy number analysis
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5.5 years ago

Dear all,

I want to filter the final results of Gistic program.

Strangely all aberrations have G-scores=0, however large number of aberrations have significant q-values (<0.15).

I know that G-score reports the amplitude and the frequency of each aberrations across all samples.

How can I interpret my results?

Can I consider only significant q-values?

Please let me know your idea about it.

Regards

Nazanin

copy number alteration Gistic G-score • 1.2k views
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