News: Phylogenetic comparative methods for studying diversification and phenotypic evolution (PCME01)
0
gravatar for oliverhooker
13 months ago by
oliverhooker60
oliverhooker60 wrote:

Phylogenetic comparative methods for studying diversification and phenotypic evolution (PCME01)

https://www.prstatistics.com/course/phylogenetic-comparative-methods-for-studying-diversification-and-phenotypic-evolution-pcme01/

This course will be delivered by Dr. Antigoni Kaliontzopoulou from the 5th - 8th November 2018 in Glasgow City Centre.

Course Overview: Phylogenetic comparative methods are commonly used nowadays to investigate how species diversification occurs and to test hypotheses about the mechanisms that drive phenotypic evolution, e.g. to model speciation and extinction, to understand why some groups are more diverse than others, to test whether phenotypic traits have evolved under neutral, directional or diversifying selection, to investigate how evolutionary rates are modified across the evolutionary history of a group etc. In all these cases, a phylogenetic hypothesis for the group of interest is combined to phenotypic and ecological data at the species level to understand the tempo and mode of evolutionary change. The objective of this course is to provide an overview of these methods and of the tools available for their implementation in the R statistical language. During theoretical sessions, we will review the main concepts and statistical tools necessary for testing hypotheses about species diversification and phenotypic evolution. These will then be implemented during practicals through worked examples to provide the participants with hands-on experience on data management and the implementation of these methods to real biological data.

Monday 5th – Classes from 09:30 – 17:30 Introduction 1-1) Why do we need PCMs? A short history of the field 1-2) Testing for phylogenetic signal 1-3) Ancestral character reconstruction 1-4) PRACTICALS

Tuesday 6th – Classes from 09:30 – 17:30 Testing hypotheses on phenotypic evolution 2-1) Phylogenetic independent contrasts and phylogenetic GLS 2-2) Phylogenetically-informed ordination 2-3) PRACTICALS

Wednesday 7th – Classes from 09:30 – 17:30 Tempo and mode of evolutionary change 3-1) Evolutionary rates: estimation and tests 3-2) Models of phenotypic evolution 3-3) PRACTICALS

Thursday 8th – Classes from 09:30 – 16:00 Miscellanea 4-1) Modelling lineage diversification 4-2) Future perspectives: multivariate extensions to PCMs 4-3) PRACTICALS

Email oliverhooker@prstatistics.com Check out our sister sites, www.PRstatistics.com (Ecology and Life Sciences) www.PRinformatics.com (Bioinformatics and data science) www.PSstatistics.com (Behaviour and cognition)

  1. October 15th – 19th 2018 APPLIED BAYESIAN MODELLING FOR ECOLOGISTS AND EPIDEMIOLOGISTS (ABME04) Glasgow, Scotland, Dr. Matt Denwood, Emma Howard http://www.prstatistics.com/course/applied-bayesian-modelling-ecologists-epidemiologists-abme04/

  2. October 23rd – 25th 2018 INTRODUCTIUON TO R (This is a private ‘in-house’ course) London, England, Dr William Hoppitt

  3. October 29th – November 2nd 2018 INTRODCUTION TO R AND STATISTICS FOR BIOLOGISTS (IRFB02) Glasgow, Scotland, Dr. Olivier Gauthier https://www.prstatistics.com/course/introduction-to-statistics-and-r-for-biologists-irfb02/

  4. October 29th – November 2nd 2018 INTRODUCTION TO BIOINFORMATICS FOR DNA AND RNA SEQUENCE ANALYSIS (IBDR01) Glasgow, Scotland, Dr Malachi Griffith, Dr. Obi Griffith www.prinformatics.com/course/precision-medicine-bioinformatics-from-raw-genome-and-transcriptome-data-to-clinical-interpretation-pmbi01/

  5. November 5th – 8th 2018 PHYLOGENETIC COMPARATIVE METHODS FOR STUDYING DIVERSIFICATION AND PHENOTYPIC EVOLUTION (PCME01) Glasgow, Scotland, Dr. Antigoni Kaliontzopoulou https://www.prstatistics.com/course/phylogenetic-comparative-methods-for-studying-diversification-and-phenotypic-evolution-pcme01/

  6. November 19th – 23rd 2018 STRUCTUAL EQUATION MODELLING FOR ECOLOGISTS AND EVOLUTIONARY BIOLOGISTS (SEMR02) Glasgow, Scotland, Dr. Jonathan Lefcheck https://www.prstatistics.com/course/structural-equation-modelling-for-ecologists-and-evolutionary-biologists-semr02/

  7. November 26th – 30th 2018 FUNCTIONAL ECOLOGY FROM ORGANISM TO ECOSYSTEM: THEORY AND COMPUTATION (FEER01) Glasgow, Scotland, Dr. Francesco de Bello, Dr. Lars Götzenberger, Dr. Carlos Carmona http://www.prstatistics.com/course/functional-ecology-from-organism-to-ecosystem-theory-and-computation-feer01/

  8. December 3rd – 7th 2018 INTRODUCTION TO BAYESIAN DATA ANALYSIS FOR SOCIAL AND BEHAVIOURAL SCIENCES USING R AND STAN (BDRS01) Glasgow, Dr. Mark Andrews https://www.psstatistics.com/course/introduction-to-bayesian-data-analysis-for-social-and-behavioural-sciences-using-r-and-stan-bdrs01/

  9. January 21st – 25th 2019 STATISTICAL MODELLING OF TIME-TO-EVENT DATA USING SURVIVAL ANALYSIS: AN INTRODUCTION FOR ANIMAL BEHAVIOURISTS, ECOLOGISTS AND EVOLUTIONARY BIOLOGISTS (TTED01) Glasgow, Scotland, Dr. Will Hoppitt https://www.psstatistics.com/course/statistical-modelling-of-time-to-event-data-using-survival-analysis-tted01/

  10. January 21st – 25th 2019 ADVANCING IN STATISTICAL MODELLING USING R (ADVR08) Glasgow, Scotland, Dr. Luc Bussiere, Dr. Tom Houslay http://www.prstatistics.com/course/advancing-statistical-modelling-using-r-advr08/

  11. January 28th– February 1st 2019 AQUATIC ACOUSTIC TELEMETRY DATA ANALYSIS AND SURVEY DESIGN Glasgow, Scotland, VEMCO staff and affiliates https://www.prstatistics.com/course/aquatic-acoustic-telemetry-data-analysis-atda01/

  12. February 4th – 8th 2019 DESIGNING RELIABLE AND EFFICIENT EXPERIMENTS FOR SOCIAL SCIENCES (DRES01) Glasgow, Scotland, Dr. Daniel Lakens https://www.psstatistics.com/course/designing-reliable-and-effecient-experiments-for-social-sciences-dres01/

  13. February 11th – 15th 2019 REPRODUCIBLE DATA SCIENCE FOR POPULATION GENETICS Glasgow, Scotland, Dr. Thibaut Jombart, Dr. Zhain Kamvar https://www.prstatistics.com/course/reproducible-data-science-for-population-genetics-rdpg02/

  14. 25th February – 1st March 2019 MOVEMENT ECOLOGY (MOVE02) Margam Discovery Centre, Wales, Dr. Luca Borger, Prof. Ronny Wilson, Dr Jonathan Potts https://www.prstatistics.com/course/movement-ecology-move02/

  15. March 4th – 8th 2019 BIOACUSTIC DATA ANALYSIS Glasgow, Scotland, Dr. Paul Howden-Leach https://www.prstatistics.com/course/bioacoustics-for-ecologists-hardware-survey-design-and-data-analysis-biac01/

  16. March 11th – 15th 2019 ECOLOGICAL NICHE MODELLING USING R (ENMR03) Glasgow, Scotland, Dr. Neftali Sillero http://www.prstatistics.com/course/ecological-niche-modelling-using-r-enmr03/

  17. March 18th – 22nd 2019 INTRODUCTION TO STATISTICS AND R FOR EVERYONE (IRFE01) Crete, Greece, Dr Aristides (Aris) Moustakas https://www.prstatistics.com/course/introduction-to-statistics-and-r-for-anyone-irfe01/

  18. March 25th – 29th 2019 LANDSCAPE GENETIC DATA ANALYSIS USING R (LNDG03) Glasgow, Scotland, Prof. Rodney Dyer http://www.prstatistics.com/course/landscape-genetic-data-analysis-using-r-lndg03/

  19. April 1st – 5th 2019 INTRODUCTION TO STATISTICAL MODELLING FOR PSYCHOLOGISTS USING R (IPSY01) Glasgow, Scotland, Dr. Dale Barr, Dr Luc Bussierre http://www.psstatistics.com/course/introduction-to-statistics-using-r-for-psychologists-ipsy02/

  20. April 1st – 5th 2019 INDIVIDUAL BASED MODELS FOR ECOLOGSITS (IBME01) Glasgow Scotland, Dr Aristides (Aris) Moustakas Link to follow

  21. April 8th – 12th 2019 MACHINE LEARNING Glasgow Scotland, Dr Aristides (Aris) Moustakas https://www.prstatistics.com/course/machine-learning-using-r-mlur01/

  22. April 8th – 12th 2019 SPATIAL MODELLING, ANALYSIS AND STATISTICAL INFERENCE OF GENOMIC DATA (SPGN01) Crete, Greece, Dr Matt Fitzpatrick https://www.prstatistics.com/course/spatial-modelling-analysis-and-statistical-inference-of-genomic-data-spgn01/

  23. May 6th – 10th 2019 NETWORK ANAYLSIS FOR ECOLOGISTS USING R (NTWA03) Myuna Bay, Australia, Dr. Marco Scotti www.prstatistics.com/course/network-analysis-ecologists-ntwa03/

  24. May 16th – 18th 2019 (please note this a 3-day course from Thursday to Saturday) AQUATIC MOVEMENT ECOLOGY USING R (AMER01) Myuna Bay, Australia, Dr. Ross Dwyer, Dr. Vinay Udyawer Link to follow

  25. May 16th – 19th 2019 (please note this a 4-day course from Thursday to Monday) Introduction to R for everyone (IRFE02) Myuna Bay, Australia, Dr Aristides (Aris) Moustakas Link to follow

  26. May 20th – 24th 2019 MODEL BASE MULTIVARIATE ANALYSIS OF ABUNDANCE DATA USING R (MBMV03) Myuna Bay, Australia, Prof. David Warton https://www.prstatistics.com/course/model-based-multivariate-analysis-of-abundance-data-using-r-mbmv03/

  27. May 21st – 24th 2019 A statistical tool box for ecologists (STBE01) Myuna Bay, Australia, Dr Aristides (Aris) Moustakas Link to follow

  28. June 10th – 14th 2019 STABLE ISOTOPE MIXING MODELS USING SIAR, SIBER AND MIXSIAR (SIMM04) Glasgow, Scotland, Dr. Andrew Parnell, Dr. Andrew Jackson www.prstatistics.com/course/stable-isotope-mixing-models-using-r-simm04/

  29. June 17th – 21st 2019 INTRODUCTION TO PYTHON FOR BIOLOGISTS (IPYB06) Glasgow, Scotland, Dr. Martin Jones http://www.prinformatics.com/course/introduction-to-python-for-biologists-ipyb06/

  30. June 24th – 28th 2019 ADVANCED PYTHON FOR BIOLOGISTS (APYB03) Glasgow, Scotland, Dr. Martin Jones www.prinformatics.com/course/advanced-python-biologists-apyb03/

  31. July 1st – 5th 2019 DATA VISUALISATION AND MANIPULATION USING PYTHON (DVMP01) Glasgow, Scotland, Dr. Martin Jones http://www.prinformatics.com/course/data-visualisation-and-manipulation-using-python-dvmp01/

  32. October 7th – 11th 2019 CONSERVATION PLANNING USING PRIORITIZR : FROM THEORY TO PRACTICE (PRTZ01) Crete, Greece, Dr Richard Schuster and Nina Morell https://www.prstatistics.com/course/conservation-planning-using-prioritizr-from-theory-to-practice-prtz01/

  33. October 21st – 25th 2019 A COMPLETE GUIDE TO MIXED MODELS (INCLUDING TEMPORAL AND SPATIAL AUTOCORRELATION) (MMTS01) Crete, Greece, Dr Aristides (Aris) Moustakas https://www.prstatistics.com/course/a-complete-guide-to-mixed-models-including-temporal-and-spatial-autocorrelation-mmts01/

-- Oliver Hooker PhD. PR statistics

2018 publications -

Alternative routes to piscivory: Contrasting growth trajectories in brown trout (Salmo trutta) ecotypes exhibiting contrasting life history strategies. Ecology of Freshwater Fish. DOI to follow

Phenotypic and resource use partitioning amongst sympatric lacustrine brown trout, Salmo trutta. Biological Journal of the Linnean Society. DOI 10.1093/biolinnean/bly032

prstatistics.com facebook.com/prstatistics/ twitter.com/PRstatistics groups.google.com/d/forum/pr-statistics-post-course-forum prstatistics.com/organiser/oliver-hooker/

6 Hope Park Crescent Edinburgh EH8 9NA

+44 (0) 7966500340

news R • 1.0k views
ADD COMMENTlink written 13 months ago by oliverhooker60
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1730 users visited in the last hour