hi I am a newbie trying to find a ortholog of a protein that I am interested in from a full genome sequence of a bacteria. I tried this and that (BLAST, etc) but could not figure out how to do this. could anyone help me?
I have a protein, I know the sequence of couple ortholog of the protein from different bacterial strains. I have a full genome sequence of a bacteria where I am trying to find the ortholog of the protein I am interested in.
any help is appreciated. Thanks alot!
you can use also orthofinder or orthomcl...for that