Where can I find GMAP? All links appear dead. Was the project abandoned?
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3.0 years ago
mcsimenc ▴ 10

I want to use GMAP for my project, because Exonerate doesn't seem to be able to do multiprocessing/threading. I see the repo: https://github.com/juliangehring/GMAP-GSNAP has not been active and at the top states:

UNMAINTAINED and OUTDATED: This was an inofficial archive of GMAP-GSNAP releases. Please use the original website for current versions of the source code. http://research-pub.gene.com/gmap/

But that link is dead, and all the other links I've found on the web to download GMAP are from this host and they're all dead. Does anyone know where I can get a current version of GMAP?

gmap gsnap alignment software availability • 1.5k views
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3.0 years ago
GenoMax 107k

http://research-pub.gene.com/gmap/ is NOT dead. I am able to open that link. Latest version of GMAP posted is from 4th July 2018.

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3.0 years ago

It is available through bioconda https://anaconda.org/bioconda/gmap

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