Is it possible to get a FastA file of orthologs using Orthofinder? I ran orthofinder (v2.2.7) like this:
orthofinder.py -f sane_files/ -t 40 -M msa
I got around 9000 orthogroups from my genomes. I would like to Blast these against some databases e.g. CAZy database. But I need a FastA file.