Entering edit mode
4.6 years ago
catechize.2.learn ▴ 120
I cannot make any useful plots in pathviews. Where am I going wrong?
library(pathview) a= c( -2,4) names(a) =c('MDM2', 'TP53') pathview(gene.data = a, pathway.id = "04115", species = "hsa")
there is no highlighting of either p53 or mdm2 in the resulting fig.
I think the answers is on the warnings you get: