Hi! I have to files generated from ORF finding tool and Genemark and a script that is supposed to convert them to Artemis friendly formats. Here is the instructions, but I don't get it, what should I write in the command?
GenePrediction2Artemis.pl - conversion script for gene predictions. =head1 PURPOSE GenePrediction2Artemis.pl converts the output file from getorf or GeneMark to a file that can be read in Artemis. Give input and output and either getorf or genemark. =head1 USAGE GenePrediction2Artemis.pl -i|input gene_precition -o|output artemis_file [ -getorf -genemark ] -getorf for getorf output files -genemark for GeneMark output files