I previously used plink to generate map and ped files for our data pipeline, but the lab director now wants me to try bcftools because plink is slow and doesn't work when two genes are the same. So I was wondering how I can generate information similar to what plink .ped and .map file contains in bcftools? Any help would be greatly appreciated.
Question: How to use bcftools to extract chromosomal position and genotypes?
12 months ago by
liangx • 0
liangx • 0 wrote:
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