Ensembl Data Slicer

Question

[genomics Newbie]

Ensembl Data Slicer Ensembl (the URL above) provides a feature where one can create a vcf with sample populations (i.e. YRI) from 1000 genomes. It appears to be restricted to a region within a single chromosome.

Any idea of how to retrieve more than a single chromosome and include all regions?

Thank you.

Answer 1

[Emily]

You need to use VCF tools and tabix. More info in this FAQ.