Question: Experience using STIR [statistical inference relief]
0
gravatar for ddeemer
15 months ago by
ddeemer0
ddeemer0 wrote:

Hello, I came across a paper by Trang et. al. (2018) titled STatistical Inference Relief (STIR) feature selection, and I was wondering the communities experience using this tool. I see that it has the ability to detect gene interactions in RNA-seq data and that the author's provided a brief discussion of their own analysis, but does anyone else have any 'stories' about how this worked out in their specific research? I'm going to run it on some data I have obtained, but I'm still trying to fully understand how it works and how I want to apply it before I start playing around.

Thank you for your response(s)!

Dane.

rna-seq stir R • 228 views
ADD COMMENTlink modified 15 months ago • written 15 months ago by ddeemer0
0
gravatar for ddeemer
15 months ago by
ddeemer0
ddeemer0 wrote:

To add, this utilizes relief-based algorithms to detect nearest neighbors in order to find gene interactions. It's a really interesting concept when trying to understand gene interactions for RNA-Seq data or SNP associations in GWAS.

ADD COMMENTlink written 15 months ago by ddeemer0
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1266 users visited in the last hour