Question

chimeric transcripts detection tool

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5.5 years ago

amitpande74 ▴ 20

Hi, I want to analyze RNAseq data for detecting Chimeric transcripts. Which tool would be best to use. I am aware of some from here Nature. Kindly help.

thanks.

RNA-Seq • 1.2k views

ADD COMMENT • link updated 5.5 years ago by enxxx23 ▴ 280 • written 5.5 years ago by amitpande74 ▴ 20

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I know, that there's STAR-Fusion. But I don't know how it compares to the other mentioned tools.

Cheer,

Michael

ADD REPLY • link 5.5 years ago by michael.ante ★ 3.8k

score 1 · Answer 1 · 2018-11-08

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5.5 years ago

enxxx23 ▴ 280

FusionCatcher https://sourceforge.net/projects/fusioncatcher/

ADD COMMENT • link 5.5 years ago by enxxx23 ▴ 280