Question: Is it possible to retrieve STRING data base ids using in R?
gravatar for ivansilbern
9 weeks ago by
ivansilbern0 wrote:

Hello Everyone,

Does anybody know if it is possible to get STRING data base ids using package in R? When checking for available columns() I do not see anything similar to STRING or STRING_ID, but may be it is hiding under some other names or is there another way to get them?

Thank you a lot for helping!

Best regards, Ivan

R • 86 views
ADD COMMENTlink written 9 weeks ago by ivansilbern0

You can use the Ensemble protein ids form UniProt to fetch STRING DB data.

Example UniProt KB links:

9606 is the organism id and ENSP00000265724 is the protein identifier.

ADD REPLYlink written 9 weeks ago by arup720
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