Question: Is there some tools can convert a table file or a csv file in to a vcf file?
gravatar for Zeason
26 days ago by
Zeason0 wrote:

I just want to find a tools that can handle the VCF file , or it can convert something else into a VCF file. Because i need to do some modification about my VCF file , such as deleting some SNP site.

snp • 108 views
ADD COMMENTlink written 26 days ago by Zeason0

Hello Zeason ,

please be more specific in describing your task. This helps a lot for given goal-oriented answers.

A standard tool for working with vcf files is bcftools.

ADD REPLYlink written 26 days ago by finswimmer7.9k

i just find the tools i want couple hours ago thanks a lot The tools i used is VariantsToTable in GATK.

ADD REPLYlink modified 21 days ago • written 26 days ago by Zeason0

Then share it with the community please. It might help others.

ADD REPLYlink written 26 days ago by ATpoint11k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1253 users visited in the last hour