Question: Heatmaps of bisulfite sequencing data
2
gravatar for biostart
8 months ago by
biostart300
Germany
biostart300 wrote:

Hi all,

What is a good software to create heatmaps of bisulfite sequencing data around some genomic feature? deepTools does not work for us in this case (probably methylation is too sparse data for deepTools).

We have a table with methylation values per each CpG, can converts it to some other format if needed. Ideally we would like to avoid programming from scratch in this case. What would you recommend to use?

Thanks!

heatmap methylation • 244 views
ADD COMMENTlink written 8 months ago by biostart300
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 989 users visited in the last hour