Hello there, I am new to RNA seq analysis, so please excuse me for this basic question. Since one week I am trying to import my StringTie reestimation results via tximport tool so that I can use it for DESeq2 tool. But I am unable to understand how exactly I can create my 'files' and import it.
My StringTie results contain for every sample e2t.ctab e_data.ctab i2t.ctab i_data.ctab SRR12345.gtf t_data.ctab
The manual which I am following is tximport here they have not given how one can use the data from StringTie results. Can anyone please guide me how I can create files and which files i can use from StringTie reestimation
Thank You in advance.