Question: Are there any analogs of the RAST and Prokka software for the plant transcriptome and genome annotation?
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gravatar for uk_plant_parasite_genome
16 months ago by

Are there any analogs of the RAST and Prokka software for the plant transcriptome and genome annotation? How can I annotate a de novo produced transcriptome of the pine? What can I do besides the BLAST approaches? Thx.

ADD COMMENTlink modified 14 months ago by Biostar ♦♦ 20 • written 16 months ago by uk_plant_parasite_genome0

Interesting ... which pine species? ;)

Can always have a look at Trapid , only transcript processing though

ADD REPLYlink written 16 months ago by lieven.sterck7.2k
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