Question: Differential correlation between pathways
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gravatar for Leite
4 months ago by
Leite370
Leite370 wrote:

I have a list of pathways that I get from differentially expressed genes using MSigDB, all with FDR value <0.05.

Is there any way to find a correlation between the pathways?

aett

Best,

Leite!

correlation pathways • 200 views
ADD COMMENTlink modified 4 months ago by Biostar ♦♦ 20 • written 4 months ago by Leite370
1

What do you mean by correlation between the pathwyas? If you are looking for common genes or heat map of genes of all pathwyas, do a leading edge analysis in gsea

ADD REPLYlink written 4 months ago by Santosh Anand4.7k
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