Question: Differential correlation between pathways
0
gravatar for Leite
2.2 years ago by
Leite1.1k
São Paulo - Brazil - Unifesp
Leite1.1k wrote:

I have a list of pathways that I get from differentially expressed genes using MSigDB, all with FDR value <0.05.

Is there any way to find a correlation between the pathways?

aett

Best,

Leite!

correlation pathways • 488 views
ADD COMMENTlink modified 2.1 years ago by Biostar ♦♦ 20 • written 2.2 years ago by Leite1.1k
1

What do you mean by correlation between the pathwyas? If you are looking for common genes or heat map of genes of all pathwyas, do a leading edge analysis in gsea

ADD REPLYlink written 2.2 years ago by Santosh Anand5.2k
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