Question: Gene cluster visualization
gravatar for Bhushan Dhamale
19 months ago by
National Institute of Immunology, New Delhi, India
Bhushan Dhamale0 wrote:

I have NRPS gene clusters isolated from running various bacterial genomes through antiSMASH. I need to generate a visualization of the gene clusters with color-coded annotation of their constituent genes as in the image in the link below. I have already gone through the methods in several papers but I was unable to find a description of how the image was generated. I have also tried various online gene cluster visualization programs, but they do not seem to fit my purpose. Could someone please point me to a program/package that would take gene clusters to generate an image similar to the one in the link below?

ADD COMMENTlink modified 19 months ago • written 19 months ago by Bhushan Dhamale0

Adobe Illustrator, or any vector-based drawing tools, could do it. Just fit the pixels/arrow sizes to the gene scale in bp.

ADD REPLYlink written 19 months ago by Vitis2.4k
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