Kindly help me with this issue
shanthi@shanthi-client2:~/Desktop/Nivya/Fastq files/SRR7189567-stage 1A$ mapper.pl trim_3_SRR7189567.fastq -e -j -k TCGTATGCCGTCTTCTGCTTGT -l 18 -m -p genome -s reads_collapsed.fa -t reads_collapsed_vs_genome.arf -v -n -h parsing fastq to fasta format discarding sequences with non-canonical letters clipping 3' adapters discarding short reads collapsing reads mapping reads to genome index Could not locate a Bowtie index corresponding to basename "genome" Please make sure you used bowtie version 1 to build the index. Usual index files have suffix .ebwt
I have used bowtie version 1. But i dont know why this is occuring.
Thank You in advance