How can I get Kimura distances for individual loci from my align.fa file from RepeatMasker
0
1
Entering edit mode
5.6 years ago
a.rex ▴ 350

I have a set of transcripts which I have run through RepeatMasker. I have an output align file which I want to parse to get Kimura distances for individual loci? Does anyone have a script to do this?

repeatmasker • 1.5k views
ADD COMMENT

Login before adding your answer.

Traffic: 2800 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6