Question: Importing networks from Cytoscape public database is very very slowly!
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gravatar for BioLite
9 days ago by
BioLite20
BioLite20 wrote:

Hi, companies,

I want to search some genes (less than 25) interactions. Because of its abundant database information, I choose to import these interactions by Cytoscape public database. However, it runs like a little tortoise, despaired.

Maybe someone would give me some useful suggestions? Thanks!!

cytoscape web database network • 108 views
ADD COMMENTlink modified 9 days ago by scooter60 • written 9 days ago by BioLite20

Ah but the tortoise has it all worked out, though. Slowly and surely does it.

Which system are you running? Can you monitor resources during the process to see what looks unusual? Can you point us to how we can actually reproduce the process that you are doing?

ADD REPLYlink written 9 days ago by Kevin Blighe33k
0
gravatar for scooter
9 days ago by
scooter60
scooter60 wrote:

What public database service are you using? I've been using STRING (through stringApp) a lot lately and it's been working fine for me.

ADD COMMENTlink written 9 days ago by scooter60
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