i am completely new to RNA seq analysis
while installing HITSAT2-2.1.0 in ubuntu 16.04, i got an error :
hisat2 -align file exited with value 1
what can i do to rectify this error?
How are you installing this? Have you tried bioconda?
Check out this
C: HISAT2 software installation
HISAT2-2.0.1 is not installed