Question: geneontology.org GO annotations no longer present
0
gravatar for brismiller
10 weeks ago by
brismiller10
Bellingham, WA, USA
brismiller10 wrote:

Hey all,

Two months go I went to http://amigo.geneontology.org/amigo/search/annotation and downloaded nearly 17222 GO annotations corresponding to the organism Tetrahymena thermophila SB210. Now I can no longer find them, there are a total of 54.

Any ideas?

Thanks in advance.

ADD COMMENTlink modified 10 weeks ago by Philipp Bayer5.9k • written 10 weeks ago by brismiller10

As an alternative, you can also get GO annotations from EnsemblProtists via their BioMart or the API.

ADD REPLYlink written 10 weeks ago by Jean-Karim Heriche18k
3
gravatar for Philipp Bayer
10 weeks ago by
Philipp Bayer5.9k
Australia/Perth/UWA
Philipp Bayer5.9k wrote:

Could you maybe have used amigo2?

http://amigo2.geneontology.org/amigo/search/annotation

has 17,511 GO terms for T. thermophila

ADD COMMENTlink written 10 weeks ago by Philipp Bayer5.9k

Thanks! Yes, that was the issue.

ADD REPLYlink written 10 weeks ago by brismiller10
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