Question: geneontology.org GO annotations no longer present
0
gravatar for brismiller
2 days ago by
brismiller10
Bellingham, WA, USA
brismiller10 wrote:

Hey all,

Two months go I went to http://amigo.geneontology.org/amigo/search/annotation and downloaded nearly 17222 GO annotations corresponding to the organism Tetrahymena thermophila SB210. Now I can no longer find them, there are a total of 54.

Any ideas?

Thanks in advance.

ADD COMMENTlink modified 2 days ago by Philipp Bayer5.8k • written 2 days ago by brismiller10

As an alternative, you can also get GO annotations from EnsemblProtists via their BioMart or the API.

ADD REPLYlink written 2 days ago by Jean-Karim Heriche17k
3
gravatar for Philipp Bayer
2 days ago by
Philipp Bayer5.8k
Australia/Perth/UWA
Philipp Bayer5.8k wrote:

Could you maybe have used amigo2?

http://amigo2.geneontology.org/amigo/search/annotation

has 17,511 GO terms for T. thermophila

ADD COMMENTlink written 2 days ago by Philipp Bayer5.8k

Thanks! Yes, that was the issue.

ADD REPLYlink written 2 days ago by brismiller10
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