Question: How to download/build GRCh37.EBVB95-8wt.ERCC genome / include spike-in genome
0
gravatar for Mike
10 weeks ago by
Mike1.1k
UK
Mike1.1k wrote:

Hi All,

I used GENCODE and Ensembl for build GRCh37 index file. But I do not know how to include the spike-in genome. I want to reproduce my results using "GRCh37.EBVB95-8wt.ERCC" genome but I dont know how to build this genome.

Thanks

rna-seq sequence genome • 181 views
ADD COMMENTlink modified 10 weeks ago • written 10 weeks ago by Mike1.1k

Hi Mike,

What have you tried?

Thanks

ADD REPLYlink written 10 weeks ago by RamRS20k

I tried with GENCODE and Ensembl for GRCh37 and build index file. But I do not know how to include the spike-in genome.

ADD REPLYlink written 10 weeks ago by Mike1.1k

Please edit your question and add this information in there. The more information you can give us, the better we can help you.

ADD REPLYlink written 10 weeks ago by RamRS20k

Thanks RamRS, I edited my post

ADD REPLYlink written 10 weeks ago by Mike1.1k
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