Question: How to download/build GRCh37.EBVB95-8wt.ERCC genome / include spike-in genome
0
gravatar for Mike
5 days ago by
Mike1.1k
UK
Mike1.1k wrote:

Hi All,

I used GENCODE and Ensembl for build GRCh37 index file. But I do not know how to include the spike-in genome. I want to reproduce my results using "GRCh37.EBVB95-8wt.ERCC" genome but I dont know how to build this genome.

Thanks

rna-seq sequence genome • 79 views
ADD COMMENTlink modified 5 days ago • written 5 days ago by Mike1.1k

Hi Mike,

What have you tried?

Thanks

ADD REPLYlink written 5 days ago by RamRS19k

I tried with GENCODE and Ensembl for GRCh37 and build index file. But I do not know how to include the spike-in genome.

ADD REPLYlink written 5 days ago by Mike1.1k

Please edit your question and add this information in there. The more information you can give us, the better we can help you.

ADD REPLYlink written 5 days ago by RamRS19k

Thanks RamRS, I edited my post

ADD REPLYlink written 5 days ago by Mike1.1k
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