Calculating recomb frequency
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2.5 years ago
dah65 • 0

Hi all,

I was wondering if anyone had any idea as to how to calculate recombination frequency from whole genome data. I have G0, F1, F2, F3 in the form of vcf files... a total sample of 60 individuals. I need to create genetic maps in order to phase the data and infer local ancestry. Any help would be greatly appreciated.

recombination rate genetic map whole-genome • 447 views
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