I have a list of ~200 SNPs, and am hoping to find a software that will allow me to identify what effects these variants will have on protein coding regions.
I know there are tools available through Ensembl's variant effect predictor, however I am working with an unpublished genome that does not have the resources required for these programs (coordinates for a closely related species).
Are there any tools available for simply determining if a SNP at any given locus is synonymous/non-synonymous with reference to an unpublished, non model genome?