Is it possible to color bonds in a ball and stick structure according their length in pymol?
This is better suited as a Question than a Forum post. See this for more information on types of posts. I'll change it to a Question type now.
What have you tried?
I am not sure it is possible automatically.
I would try to make a script.
this site below looks helpful
Also see these posts and site:
Draw Bonds In Pymol And Color Them
Pymol Scripting Help
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