Coloring bonds in pymol
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2.8 years ago
gantapa • 0

Is it possible to color bonds in a ball and stick structure according their length in pymol?

Pymol visualization • 1.6k views
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This is better suited as a Question than a Forum post. See this for more information on types of posts. I'll change it to a Question type now.

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What have you tried?

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I am not sure it is possible automatically.

I would try to make a script.

this site below looks helpful

https://pymolwiki.org/index.php/Distance#Usage

Also see these posts and site:

https://pymolwiki.org/index.php/Set_bond

Draw Bonds In Pymol And Color Them

Pymol Scripting Help

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