I'm doing a project which I have to use two separate project on GEO, one of them is Agilent array and second is RNA-Seq.
I've searched a lot, but there were no straightforward answer to my question.
Because both condition samples are not available in a single project I have to use different studies.
Is there anyway to do DEG analysis based on these both platform? ( please share your link or code)
Thanks a lot.